blastn of complement or reverse strand
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Entering edit mode
3 months ago
lagartija ▴ 150

Hi, Is there a way to perform blastn also on reverse sequences ? (i.e not reverse complement but only reverse)

Thanks!

blast • 184 views
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1
Entering edit mode
3 months ago

Simultaneous search won't work but you could:

  • reverse the query sequence and blast with that.

or

  • reverse your target sequences and build a blast database out of that data.
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