conversion of fasta file format to tabular format
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2.6 years ago

Hi, I have my fasta file of RNA sequence which I wanted to identify motif via MEME web-based tool, however I had some issue with the sequence identifiers warned as too long during the file submission.

Therefore, I wanted to edit those sequence identifiers list after converting to tabular format to make it easier as I have to deal with more than 1000 identifiers.

Kindly share the command line used for conversion of the format.

Thank you.

fasta tabular • 871 views
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i wanted to edit those sequence identifiers list after converting to tabular format to make it easier as i have to deal with more than 1000 identifiers.

Post an example input and expected output.

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Biopython SeqIO module has option to convert fasta to tabular format: https://biopython.org/wiki/SeqIO

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