I need to delete the blank spaces between words in the headers from my fasta file.
> Proteobacteria;_1 # 52 # 312 # 1 # ID=1_1;partial=01;start
Thanks a lot!
sed -i 's/\ //g' file.fasta
Your example output leaves a space in still. I've assumed that's a typo based on your request.
You can use SEDA (https://www.sing-group.org/seda/). The "Rename header / Replace word" operation (https://www.sing-group.org/seda/manual/operations.html#replace-word) allows to do this.
Login before adding your answer.
Use of this site constitutes acceptance of our User Agreement and Privacy