I wonder if there's any platform that allows me to manipulate NGS data by coding.
I used to apply NGS to verify some experiments like
Hybridoma IgG sequencing Quantify error-prone PCR error occurence
where I could simply feed a tiny portion of the data into R and manipulate by coding.
While it saved me much time from reading package manuals, the limitation is that R is usually single-threaded and weak in handling large data set.
I wonder if there's any R counterpart that's more suitable for NGS data analysis.
Thank you so much.