As rpolicastro said, the problem had to do with the conda channels. The solution for me was:
conda create -n cutadapt -c conda-forge -c bioconda cutadapt python=3.9
I'm having trouble installing cutadapt.
I just installed conda and created a new environment for cutapdat with a specific python version (since it send me a message before about that).
conda create -n cutadapt python=3.9
When I enter the command
conda install -c bioconda cutadapt the following message appears
UnsatisfiableError: The following specifications were found to be incompatible with each other: Output in format: Requested package -> Available versionsThe following specifications were found to be incompatible with your system: - feature:/linux-64::__glibc==2.35=0 - feature:|@/linux-64::__glibc==2.35=0 - cutadapt -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17'] Your installed version is: 2.35
But when I run
conda list in my cutadapt environment to see the packages it says:
packages in environment at /home/camila/miniconda3/envs/cutadapt: Name Version Build Channel _libgcc_mutex 0.1 main _openmp_mutex 4.5 1_gnu ca-certificates 2022.4.26 h06a4308_0 certifi 2021.10.8 py39h06a4308_2 ld_impl_linux-64 2.35.1 h7274673_9 libffi 3.3 he6710b0_2 libgcc-ng 9.3.0 h5101ec6_17 libgomp 9.3.0 h5101ec6_17 libstdcxx-ng 9.3.0 hd4cf53a_17 ncurses 6.3 h7f8727e_2 openssl 1.1.1o h7f8727e_0 pip 21.2.4 py39h06a4308_0 python 3.9.12 h12debd9_0 readline 8.1.2 h7f8727e_1 setuptools 61.2.0 py39h06a4308_0 sqlite 3.38.3 hc218d9a_0 tk 8.6.11 h1ccaba5_1 tzdata 2022a hda174b7_0 wheel 0.37.1 pyhd3eb1b0_0 xz 5.2.5 h7f8727e_1 zlib 1.2.12 h7f8727e_2
So I don't know what the problem may be. Any thoughts?
Thanks a lot.