How to remove evidence tags and unnecessary information in the uniprot tab file
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4 months ago
devhimd • 0

How to remove evidence tags and unnecessary information in the uniprot tab file

FILE UNIPROT TAB • 308 views
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I think you'll get more help if you share an example (e.g. head of the file including column names) and a programming language that you'd like to use (R, python, bash)

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4 months ago
devhimd • 0

5 P25373 CROSSLNK 11; /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)"; /evidence="ECO:0007744|PubMed:22106047" DISULFID 27..30; /note="Redox-active; alternate"; /evidence="ECO:0000269|PubMed:18473363" MOD_RES 27; /note="S-glutathionyl cysteine; alternate"; /evidence="ECO:0000269|PubMed:17327665, ECO:0000269|PubMed:18473363" FUNCTION: Component of the glutathione system which performs several activities such as glutathione-dependent oxidoreductase, glutathione peroxidase and glutathione S-transferase (GST) activity (PubMed:11875065, PubMed:12684511). The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing cytosolic protein- and non-protein-disulfides in a coupled system with glutathione reductase. Required for resistance to reactive oxygen species (ROS) by directly reducing hydroperoxides and for the detoxification of ROS-mediated damage. GRX1 is less active as an oxidoreductase than GRX2 (PubMed:9571241, PubMed:18992757, PubMed:20417731). {ECO:0000269|PubMed:11875065, ECO:0000269|PubMed:12684511, ECO:0000269|PubMed:18992757, ECO:0000269|PubMed:20417731, ECO:0000269|PubMed:9571241}.

i want to use python language remove all the Evidence tags and PubMed id

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