opern access database with vcf files for healthy people (controls)
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5 weeks ago
Liubov ▴ 20

Hi!

Is there some open-access database, where I could get vcf files for some healthy people (preferably with EU ancestry and with hs27 reference)? I have some data for people with the disease and I would like to train a machine learning model to distinguish between people with and without this disease.

So far I found that gnomAD has a lot of data, but as I understand I cannot get information about single individuals from there, only statistics about the populations for each SNP.

If you know such a database, where vcfs for individuals could be obtained, please share.

Thanks in advance!

VCF database controls • 231 views
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5 weeks ago
Jeremy ▴ 340

Check out the Simons Genome Diversity Project: Simons Genome Diversity

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