Entering edit mode
23 months ago
Abdellrhmanakl
•
0
i have a tsv file and i want to convert it to fasta please help
Moderator edit note: I have removed the link as it provided a direct link to an archive download and could present a risk.
Example data should be provided as a text snippet
Please include a short sample from your input and desired output.
https://biopython.org/wiki/SeqIO
SeqIO.convert doesn't work with TSV's. I would recommend removing the tabs via iteration then joining the lists together in a new fasta file.
Hope this helps.
SeqIO can read and write tab-delimited sequence files and it is my understanding that a TSV file is a tab-delimited file so I'm not sure what the issue would be