smartpca from the Eigenstrat package
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11 days ago
Stefania • 0

Hi I have a question about how to complete the .snp.txt file for Eigenstrat, this file include: ID SNP(rs), chromosome number, genetic positions, physical position, REF and ALT. If i have a mitochondrial DNA how can i complete this snp.txt file, becouse the mitochondrial ID, chromosome number and genetic positions doesen't exist! What can i insert in this missing value?

Tanks

smartpca EIG MT • 69 views
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