Bedtools Getfasta in snakemake
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3 days ago
Fadwa ▴ 10

Hi,

I have multiples files containing Ids of genes and genome sequences in another file and i would like to extract nucleotide sequences, only when the name of files match using snakmke, it does his job, but it generates empty files that i want to drop.

can you help me

thank you

Bedtools Snakemake Wildcards • 101 views
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what's your downstream analysis (after getfasta) ?

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I have nothing to run after this rule.

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