Clustered, annotated dotplot to scRNA-Seq data
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6 weeks ago
tomer9w • 0

Hi! I would love some help with this one:

I wish to visualize a complex dotplot with text annotation bar and distinct color per cluster.

I am familiar with ComplexHeatmap and pHeatmap which are not useful in this case.

Attached is an reference figure enter image description here

Thanks!

scRNA-Seq dotplot visualization • 260 views
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Entering edit mode
6 weeks ago
fracarb8 ▴ 810

Have a look at Clustered_DotPlot from scCustomize.

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5 weeks ago

The dittoSeq package also offers a dotPlot function that can be customized quite a bit and will work for both Seurat and SCE objects (other than scCustomize, which seems to support only Seurat AFAIK)

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