Protein protein interaction

Question

[fatoumata.g.fofana]

How can I identify and remove redundant interactions in protein protein interaction datasets from BioGRID?

[Pierre Lindenbaum]

what's your input ?what did you try ?

[fatoumata.g.fofana]

Plasmodium falciparum (3D7) protein protein interaction curated data downloaded from BioGRID database.

Below the link:

https://thebiogrid.org/103801/publication/a-protein-interaction-network-of-the-malaria-parasite-plasmodium-falciparum.html

For the identification I tried excel to do it using "Conditional Formatting > Highlight Cells Rules > Duplicate Values"

[Pierre Lindenbaum]

I tried excel to do it

[fatoumata.g.fofana]

[fatoumata.g.fofana]

[Pierre Lindenbaum]

download the database as a TSV format, use linux with uniq or sort -u to get what you want

[fatoumata.g.fofana]

Ok thank you. I will switch to Linux.

[Ram]

I've removed unnecessary tags - don't use your post content as tags, use targeted subject matter keywords instead.

[fatoumata.g.fofana]

Ok, noted.