How to analyze the mirbase mature sequence aligned miRNA output file
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21 months ago
khq5801 ▴ 10

Hi,

I have performed blastn (ncbi-blast+) on my miRNA reads with the miRBase mature miRNA and got the output. I would like to analyze the data and separate the information in the form of Query read, length, read count, %identity, gap, Q.start, description, etc. from the output file. How should I proceed further. Is there any script or command that will be helpful. Kindly provide your valuable suggestion.

mirbase NGS miRNA data-analysis ncbi-blast • 359 views
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