I am working with transposon and repeated-sequences prediction in some non-model oomycetes. I used RepeatModeler and the majority of the detected families are classified as rnd-something (example: rnd-1_family-8). I am new to transposon analysis and I cannot really find much information on what these rnd families are. Can someone suggest me a way on how to interpret this type of classification? Should I use another program to classify transposons?
Thanks in advance for the answers.