extracting sequences from a bam file
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8 weeks ago
Bogdan ★ 1.3k

HI everyone,

How would you extract sequences from a bam file based on NM:i:0 (i.e. the perfect matches), without using grep ?

Thanks, Bogdan

bam • 182 views
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Entering edit mode
8 weeks ago
LChart 840

samtools view ${bam} -d NM:0

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