Does Cellranger filter out doublet?

Question

[Emily]

Does 10x's Cellranger filterout doublet or does it require additional steps to filter those out using the files from "filtered_feature_bc_matrix" generated by the software

Answer 1

[ATpoint]

FAQ: https://kb.10xgenomics.com/hc/en-us/articles/360001074271-Does-Cell-Ranger-automatically-exclude-doublets-

[Emily]

Thank you. Do you know if there is tutorial on how to execute scrublet (scanpy)? The only thing i can find is this https://scanpy.readthedocs.io/en/latest/generated/scanpy.external.pp.scrublet.html#scanpy-external-pp-scrublet so im a bit confused as to how to use the code. Do i just do external.pp.scrublet(adata)?