VST in DESeq2 giving negative values
1
0
Entering edit mode
6 weeks ago

Hi, I used the varianceStabilizingTransformation function on my dds object. However, the VST output results in negative values for certain genes, is that supposed to happen? I know this can happen with the rlog transformation, but does it also happen with vst ?

DESeq2 R Bioconductor • 244 views
ADD COMMENT
1
Entering edit mode
ADD COMMENT

Login before adding your answer.

Traffic: 832 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6