Hi,
I am new into this field. Could someone please suggest the best way you have used to detect copy number variants from human WGS data?
I did some research online, suggesting to use control-FREEC; CNVkit. Due to lack of experience, I am unable to tell which one works the best.
Any comment is appreciated!
Thanks for the quick response, Pierre. Are you suggesting to use solely one tool or a combination of a bit of those.