Pipeline with HISAT bulk RNA seq alignment
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23 months ago
synat.keam ▴ 100

Dear All,

I have so far used Kallisto to align my bulk RNA seq data, but also keen to explore HISAT. I am wondering whether you could point me to the tutorial including computer set up, command line, prepare files etc up to generating gene/transcript count for each sample. Im not good at computer, so like to see the detailed steps. Have a goodd day. Looking forward to hearing from you soon.

Kind Regards,

Synat,

HISTA • 706 views
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Hi Arup,

Brilliant! Thank for the link to HISAT.

Synat

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