blastp -query homo.faa -db cow.faa -out homo_blast.csv -outfmt 6 -evalue 0.00001 -max_target_seqs 1 -num_threads 32
I got the below error while performing protein blast with the code mentioned above
BLAST Database error: No alias or index file found for protein database [cow.faa] in search path
When I revised the code by specifying the path, the problem was not resolved. When I typed subject instead of db, the problem was solved, but I'm not sure if it's correct.