What is the normalization status of metabric data?
0
0
Entering edit mode
10 weeks ago
dare_devil ★ 1.6k

I used the data_mrna_agilent_microarray.txt data from the portal brca_metabric. The information about this data are given in the file meta_mrna_agilent_microarray.txt The information is as follows:

cancer_study_identifier: brca_metabric
genetic_alteration_type: MRNA_EXPRESSION
datatype: CONTINUOUS
stable_id: mrna
show_profile_in_analysis_tab: false
profile_name: mRNA expression (microarray)
profile_description: Expression log intensity levels (Illumina Human v3 microarray)
data_filename: data_mrna_agilent_microarray.txt

The information does not tell me whether the data is normalized or not?

metabric normalization microarray cbioportal • 148 views
ADD COMMENT

Login before adding your answer.

Traffic: 2475 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6