TBTools for synteny analysis in a gene family
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22 months ago

Dear biostars community,

I am trying to run TBTools for synteny analysis of a gene family. Everything ran fine until the "Quick run MCScanX Wrapper" step, i am getting "0" collinear genes. Is that possible? FYI, I have used the genome protein file for the blast. Looking forward for your help. Thank you for your time.

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Chanderkant

MCScanX Synteny Gene-family TBTools • 732 views
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I'm having the exact same problem. Have you perhaps managed to fix it yet?

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