Entering edit mode
5 months ago
ashenflower ▴ 20
I would like to assess a new method that I am trying to implement for performing variant calling, in particular for large structural variants (so, not only SNPs), but I would need some kind of "ground trurth". It would be incredibly useful if any of you could point me to a reference genome for which there is another one with annotated variants SVs, or to a good variants simulator. Even if you could just tell me how to look for such data would be great.
Thank you in advance! :)
Is this enough? https://www.nist.gov/programs-projects/genome-bottle
Hi! Thank you for your comment, this is surely useful, I'll take a closer look