How to download multiple SRA fasta files in ubuntu
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21 months ago
wyt1995 ▴ 40

Hi,

I often times have to do manual download by copying likes of every SRA dataset by hand and use fastq-dump. I want to download SRA RNA-seq data at ones, buy don't know how. Thanks in advance

--fastq-dump SRR12491510 --gzip --split-3
--fastq-dump SRR12491509 --gzip --split-3
...
--fastq-dump SRR12491506 --gzip --split-3

↓↓↓ want to change like

--fastq-dump SRR12491510 SRR12491509 ... SRR12491506 --gzip --split-3
ubuntu sra-toolkit fastq-dump • 590 views
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