Hello, I had trimmed fastq files with trimmomatic 0.39, and I used pe files to perform bwa mem. However, there was the error and it' stopped. This is the message:
[mem_sam_pe] paired reads have different names: "A01057:210:H37TJDSX3:2:1160:10809:6621", "A01057:210:H37TJDSX3:2:1160:13774:6621" [mem_sam_pe] paired reads have different names: "A01057:210:H37TJDSX3:2:1160:11080:6621", "A01057:210:H37TJDSX3:2:1160:13792:6621"
The file names of fastq.gz are "17_pe1.fastq.gz" and "17_pe2.fastq.gz" How can I solve it??