Entering edit mode
16 months ago
Noé
•
0
Hi! I'm new to creating phylogenetic trees. I currently have a VCF file from doing the variant calling. I'm now trying to make a phylogenetic tree and implement bootstrapping using RAxML. However, I noticed the input for RAxML needed is a Newick file (.nwk). How would I make a Newick file from my VCF file? Or how does the workflow generally go?
Multi-Sample Vcf To Phylogenetic Tree.