Entering edit mode
16 months ago
joukl.zdenek
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0
Is there any downloadable database of verified protein domains (i. e. domains that have been observed from at least 95%) including IDs and taxon IDs? In ideal case, it should be possible to download its nonredundant version. If this is not possible directly, I could use a list of nonredundant domain IDs in case one exists – do you know any? Many thanks!
NCBI Conserved Domain Database can be downloaded. SMART, PFAM, InterPro all should be downloadable at respective sites.