create 'negative' bed annotation from bed
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8 weeks ago
joe ▴ 380

Hi community,

Is there a convenient command line tool that accepts and bed (and chr lengths) and returns what is excluded from the bed? Like a 'negative' of the bed (or other annotation file)? TIA!

bed gtf gff • 368 views
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8 weeks ago
ATpoint 68k

bedtools complement

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Exactly what I need, thanks!

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