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16 months ago
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I am looking for gene targets of differentially expressed microRNAs. I have been using Transcriptome Analysis Console, but it is very limited in terms of data visualization, GO analysis, etc, thus looking for free online software. Unfortunately, most of what I have tried online does not recognize my micro RNA accession numbers (MIMAT... and MI...), thus I am unable to use these tools. Do you know of any that would accept my accession numbers? My data contains ~3500 microRNA entries. Thanks!
P.S. If this helps: data is from microarray, using CEL files and I do not know how to use R.
These accession numbers are from miRBase: https://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=MIMAT0000001
Yes. However, my issue is finding online software that recognizes the accession numbers. For example, when I paste these accession numbers, I get 'ID not identified' . Therefore, I am unable to begin the analysis.