Coexpression Network

Question

[abel.belachew]

Hello,

I have mRNA expression data for 10 genes from RNASeq. I am interested to visualise the data in the form of a co-expression network using Cytoscape.

I would like to know how I can do that. Basically, what should my input data look like and what format should it be in?

Any help with this will be highly appreciated.

Thanks!

[seidel]

Have you read the manual? http://manual.cytoscape.org/en/stable/ it has a link to many basic tutorials: https://github.com/cytoscape/cytoscape-tutorials/wiki