SetAllIdents and Idents function not found
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15 months ago

Hello-- I am trying to perform DEG analysis-- differential expression between clusters in an scRNA-seq study. I am very new to MAST however, and when I tried to set the following:

seurat<- Idents(seurat, id = "CellType")

I get an error reading:

Error in Idents(suerat, id = "CellType"): could not find function "Idents". 

Any suggestions??

scrna-seq • 364 views
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Entering edit mode
15 months ago
Mensur Dlakic ★ 27k

I did a Google search and the answer is there. Chances are that your Seurat version is too old.

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