How to get a partition file for phylogenetic trees?
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13 months ago
YOUSEUFS ▴ 30

I currently have a concatenated alignment file of 9 protein coding genes from around 200 organisms. I understand that to improve my phylogenetic inference I should implement a partition analysis to infer molecular evolution rates on a per gene basis. However, how do I create a partition file after the concatenation and trimming (Using Gblocks) of the genes?

phylogenetic python analysis partition • 365 views
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