How can I obtain the significantly different taxa data from this Aldex plot ? (Using R)
Entering edit mode
8 months ago
ohtang7 ▴ 40

Hello !

I am trying to conduct relative difference comparison test and used Aldex2 package for the first time. (I failed to use Aldex 2 in Qiime2 ....)

As you can see, I finally got this plot in the R but I don't know how to find the specific taxa that are shown as significantly different (maybe red color).

Is there anyone who can suggest me to find the way forward ? (And also, please let me know the difference of black colored dot and gray colored dot)

enter image description here

enter image description here

Any suggestion regarding to my question would be welcomed !!

Thank you in advance.

taxa test Aldex2 of abundance Relative R • 227 views

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