Plot in R: Presence of bacteria type A vs bacteria type B in different groups
Entering edit mode
10 weeks ago
flourde • 0

I would like to make a plot similar to the one here in R. I have a phyloseq object that contains the abundance of all taxa and samples associated with each group. What I want to do is to categorize each taxa as Type A or Type B then plot the abundance of the taxa by Type A/B and split them by treatment group.

Any advice on how to do this?

Presence of bacteria type A and type B in different treatment groups

boxplot phyloseq plot abundance ggplot2 R • 203 views

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