Entering edit mode
9 weeks ago
rheab1230 ▴ 140
Hello everyone, I was trying to use HiTC software but I am not able to understand how to input my dataset. I used this command: x <- importC(con=chr9,xgi.bed=colnames(chr9),ygi.bed = rownames(chr9)) error in evaluating the argument 'con' in selecting a method for function 'import': 'path' must be a single string or a connection object My chr9 dataset look like this:
0 40000 80000 0 0 0 0 40000 0 0 73.527
Wherein each column and row corresponds to a bin size and value corresponds to interaction freq. Thank you.
From the error you may need to specify the file path instead of passing it the imported data.