Anyone know where I can download the latest version of 1000 Genomes, on build hg38, in VCF format (or PLINK format), that ALSO contains the dbSNP RSid in the VCF ID field?
I looked at the IGSR website, dbSNP, UCSC, etc. So far no luck. All have either '.' in the ID field or "chrom:pos:a1:a2" in the ID field.
If you can take a slightly different route, I'd recommend getting the gnomAD VCF which has both 1000g and dbSNP annotations. If not, it might be easier to download the 1000g VCF, the latest dbSNP VCF and use
bcftools annotateto get IDs from the latter on to the former.