cell density scRNAseq
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Entering edit mode
13 months ago
pingu77 ▴ 20

Hello,

I am new to scRNAseq data analysis. I am trying to understand the meaning of plotting cell density (contour plot). For example, the package scDataviz can plot/reveal the regions with high cell density but how should I interprete the results? what is the biological implication of seeing an higher cell density in a particular cluster? What does it mean cell density?

Thank you in advance for your help!

contourPlot scRNAseq • 359 views
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