How to convert a GBFF GFF to GTF
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Entering edit mode
18 months ago
CECEL • 0

I used this code:

bp_genbank2gff3 viral.1.genomic.gbff
gffread viral.1.genomic.gbff.gff -T -o viral.1.genomic.gtf

with the fna from ViralRefSeq. I can't convert the .gbff to .gtf for use in CellRanger mkref. How can I make this conversion?

Somebody can help me, please?

scRNA gff gtf • 834 views
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Entering edit mode
18 months ago
GenoMax 146k

See: Convert .gbff (gene bank flat format) to gff3, gtf

You can't convert GBFF files to GTF.

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