Entering edit mode
10 months ago
fifty_fifty
▴
60
I am building a database for genome annotation of dogs' WES. I follow snpEff instructions from here My gtf, fasta, cds files are all from the same source here However, in Step 3 (checking database) I get an error that transcript IDs from the database (sample) 'XM_038535084.1' do not match any IDs from the fasta file '1_cds_XP_038396667'.
I wonder if I should rename the IDs from the CDS file just removing '1_cds_' part. Or might the issue be in something else?
