I am trying to extract the coordinates for the exons in numerous genes.
For example, APC using the MANE transcript: NM_000038.6
When downloading the USCS table browser for just exons from HG38 I get these coordinates for the exons (example exon 1):
chr5 112737884 112737925
However, when I look on ensembl https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000134982;r=5:112707498-112846239;t=ENST00000257430 the coordinates are one base off - does anyone know why or which coordinates I should use?
chr5 112737885 112737925