I have a fastq file looks like this:
@E100062344L1C001R00100004672/1 TGGCCATTTTCCGAAAGAACGAGTGCTTTTATATTTGAAACGCTCGGATAGTCAGTGTAC + 6C?;?F@DFD?F:<FB>FEFF3?EFCEEEDFDF;EFE5EFB88C9@0F9EDF9F7;EFED @E100062344L1C001R00100007908/1 TTATACAACGTTTTCAAAGTATCAAAATACGTATTAACTTATTTTCATTAATATTATGTTGTTGTTTTTTTTTTAAATT + EGGFGDF<DFFBFGGFFFGFFF9FFFF3FFFEFFFGFDFDFF?GFFG6GGFDFGCBFFDFGDFE@FGFGFGGBFB@F>F @E100062344L1C001R00100042396/1 AGCTAGTTAGCAAACTCACATTGGTTTTCAAAATTCCAACACCTTTTGGTAGAAGAAAA + FFFFGF@3FFFFF;BDGGFDEGEFBFFCGGFFGFGFCDFFFGC@FECF<FFF?<EFGF? @E100062344L1C001R00100052634/1 CAGCAGAAGCAGACGCCAGAAGAACGGCCAAGGAAGATAAGATTCGTGGTGAACTCACCG + FC.=A0E*B8:<51F66A3<E58/8C<ECE;==0EFC@EA6EFCCA+5@E+1F:A6@CCC
and also I have IDs file that looks like this:
I am trying to extract for my fastq file the sequences that have their id in my txt.file. I am using seqkit for that, but with no success. Do you have any idea that how can I extract the sequences of my IDs?