ERROR: LoadError: UndefVarError: `composition` not defined ?
0
0
Entering edit mode
10 months ago
Sapphire ▴ 10

Hi, i am trying to run Protparam and it gives the following error. Please let me know, how to use it on multiple files if anyone has used it before.

./protParamWrap -s example/sequence.fasta

|Seperating .fasta file into single files...                 |
|...                                                         |
|Creating protParam files...                                 |
|...                                                         |
|Calculating protein parameter based on sequence...          |
|     Processing file 1 of 26                                |
ERROR: LoadError: UndefVarError: `composition` not defined
Stacktrace:
 [1] protparam(protein::LongAA)
   @ ProtParam ~/miniconda3/envs/julia/share/julia/packages/ProtParam/Cq85q/src/ProtParam.jl:98
 [2] top-level scope
   @ ~/neelam/protParamWrap/34wt24-protParam.jl:7
in expression starting at /home/bvsbic/neelam/protParamWrap/34wt24-protParam.jl:7
|     Processing file 2 of 26                                |
ERROR: LoadError: UndefVarError: `composition` not defined
Stacktrace:
 [1] protparam(protein::LongAA)
   @ ProtParam ~/miniconda3/envs/julia/share/julia/packages/ProtParam/Cq85q/src/ProtParam.jl:98
 [2] top-level scope
   @ ~/neelam/protParamWrap/ACO25189-protParam.jl:7
in expression starting at /home/bvsbic/neelam/protParamWrap/ACO25189-protParam.jl:7
|     Processing file 3 of 26                                |

Thank you

Protpram • 301 views
ADD COMMENT

Login before adding your answer.

Traffic: 2966 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6