FATAL ERROR on phASER
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19 months ago
Shani • 0

Hello everyone, I'm encountering issues regarding my vcf file when running phASER. I've tried indexing it both with tabix (tabix -p vcf file.vcf.gz) and bcftools (bcftools index -t file.vcf.gz) and both processes resulted with a file.vcf.gz.tbi file type. in spite of that, each time I try to run phASER (with either of them), i keep getting this error; "FATAL ERROR: VCF file is not tabix indexed" has anyone encountered a similar difficulty and has insights regarding possible solutions?

thanks in advance :)

phASER • 422 views
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what was the pHASER command line ?

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