Issues while running htseq-count

Question

[Foad]

My data is Candida glabrata and when i use htseq-count, no read is mapped to the gene_id.

Thank you for your time and help.

Foad

htseq-count GSNO_SRR1582646.sam Candida_glabrata_genome.gtf > GSNO_SRR1582646.count

10975 GFF lines processed.
8843 alignment record pairs processed.

head GSNO_SRR1582646.count 

gene-CAGL0A00165g   0
gene-CAGL0A00187g   0
gene-CAGL0A00209g   0
gene-CAGL0A00231g   0
gene-CAGL0A00253g   0
gene-CAGL0A00275g   0
gene-CAGL0A00297g   0
gene-CAGL0A00319g   0
gene-CAGL0A00341g   0
gene-CAGL0A00363g   0

[Ram]

Can you please show us the output to:

grep -m25 -v "^#" Candida_glabrata_genome.gtf

[Foad]

Hi,

i want to send it to you, but i get this error.

**content

Language "nl" is not one of the supported languages ['en']!**

[GenoMax]

Please add the following line (as shown) below your post content. This should address the error above.

<a href="" title="Text added because biostars parser needs it"></a>

[Foad]

Unfortunately, it is not possible.

[GenoMax]

What is not possible? This is a simple line you need to add when you respond. Copy and paste it as shown in editor window. Including the brackets and all.

[Foad]

What I mean is that it gives the same error as befor.

[Ram]

That's odd. With 25 lines, there's enough content for the parser to stop complaining about language unless there's some language specific content in the 25 lines.

Please paste the 25 lines in a GitHub gist and paste the link to the gist in a comment (instructions here)