My data is Candida glabrata and when i use htseq-count, no read is mapped to the
Thank you for your time and help.
htseq-count GSNO_SRR1582646.sam Candida_glabrata_genome.gtf > GSNO_SRR1582646.count 10975 GFF lines processed. 8843 alignment record pairs processed.
head GSNO_SRR1582646.count gene-CAGL0A00165g 0 gene-CAGL0A00187g 0 gene-CAGL0A00209g 0 gene-CAGL0A00231g 0 gene-CAGL0A00253g 0 gene-CAGL0A00275g 0 gene-CAGL0A00297g 0 gene-CAGL0A00319g 0 gene-CAGL0A00341g 0 gene-CAGL0A00363g 0