How to fetch published paper of a BioProject
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5 weeks ago
Morteza • 0

How can I find the published paper for this project id: PRJEB27236

BioProject pumbed NGS • 381 views
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5 weeks ago
Basti ★ 2.0k

The original publication is : https://www.science.org/doi/full/10.1126/sciadv.aav5590

Found as study alias is E-MTAB-6892 on ArrayExpress : https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-6892?query=E-MTAB-6892

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Thank you. If there is not publication section in ArrayExpress, can I be confidently sure that there is not any publication for the study?

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Ideally at some point the publication is linked in Pubmed and you can then find it using EntrezDirect. An example below.

$ esearch -db bioproject -query PRJNA111397 | elink -target pubmed | efetch -format abstract
1. Nature. 2009 Feb 19;457(7232):1028-32. doi: 10.1038/nature07759. Epub 2009 Jan
 25.

Post-transcriptional processing generates a diversity of 5'-modified long and 
short RNAs.

Does not work for the ID you posted yet.

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Generally, is there any way that can make me sure that there is not any published paper for a RNA-Seq BioProject?

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