CIBERSORTx error (error in rep(2, size * length(cells) -1)) : invalid 'times' argument
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9 days ago
Mr. George • 0

Hi all, I am brand new to using CIBERSORTx for cell type deconvolution. I am trying to create a signature matrix from a single-cell reference matrix, but I am encountering this error:

Error in rep(2, size * (length(cells) - 1)) : invalid 'times' argument
Calls: CIBERSORTxFractions -> makeRefandClassFiles
Execution halted

Here is an example of what my single-cell reference matrix looks like: single-cell reference matrix

Any advice would be greatly appreciated! Thank you in advance.

deconvolution RNA-seq CIBERSORTx CIBERSORT • 122 views
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