RNAhybrid + svm_light for miRNA target prediction
0
0
Entering edit mode
9 days ago
Lucrezia • 0

Hello,

I have miRNA data from a non-model species (fish) and I am trying to identify the putative gene targets of the differentially expressed miRNAs due to my treatment.

From the literature, a common practice seems to get the overlap between the results of TargetScan, Miranda and RNAhybrid + svm_light. After running the three softwares, I am now trying to understand how to use svm_light. I am not familiar with SVM and I can't seem to find any tutorial or clear explanation on how to use svm_light on RNAhybrid results.

Can anyone either point me in the right direction or explain me how to use svm_light?

Thanks!

microrna svm target rnahybrid • 96 views
ADD COMMENT

Login before adding your answer.

Traffic: 3424 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6