Entering edit mode
9 weeks ago
maryak
▴
20
Where do I download RNA-seq expression data for normal samples? My study is related to breast cancer metastasis identification.
go to the TCGA...
Your data analysis would be confounded. Control samples from GEO and cancer samples from your lab.
better get everything from the TCGA, otherwise will have batch effect..
TCGA still has batch effects…