Somatic Variant Calling from Nanopore Data
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3 months ago
adarsh_munna ▴ 50

Hi,

I have some cancer samples and normal control samples, sequenced by Nanopore (Amplicon sequencing). I read about ClairS from one source. I am just curious to know if there are any more tools for doing similar work.

Please suggest.

Thanks

variant somatic calling cancer nanopore • 433 views
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3 months ago

Hi, I am not an expert but have you looked at the software EPI2ME from Nanopore for variant calling?

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