PyMOL scripting with GPUs on LSF
0
0
Entering edit mode
7 weeks ago
noodle ▴ 590

Hi Biostars,

I'm wondering if PyMOL should be compatible with GPUs when running from a command line as pymol -c myscript.py, or if there is some specific package or setting that should be updated in the script?

Also if someone is aware of limitations here I'd be grateful to know them.

I'm trying to streamline some structural analysis with HPC/LSF cluster where resources aren't limiting.

Thanks!

pymol hpc pse lsf structure • 322 views
ADD COMMENT
1
Entering edit mode

https://pymol.org/support-platforms.html? does not mention support for GPU's as far as compute goes.

ADD REPLY
0
Entering edit mode

I think this is outdated, we're up to pymol 3 now!

ADD REPLY
0
Entering edit mode

I don't see any mention of GPU support even with v.3.x: https://pymol.org/support.html?#installation

ADD REPLY

Login before adding your answer.

Traffic: 2298 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6